STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61979.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (367 aa)    
Predicted Functional Partners:
EEZ61980.1
KEGG: bpm:BURPS1710b_A2293 0.00012 TetR-family regulatory protein K00356; Psort location: Cytoplasmic, score: 8.87.
 
     0.638
hypB
Hydrogenase accessory protein HypB; KEGG: reh:H16_A1087 1.6e-07 ureG; UreA amidohydrolase (urease) regulatory and maturation protein UreG; Psort location: Cytoplasmic, score: 9.98.
 
     0.446
EEZ61978.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cte:CT0282 1.2e-73 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.98.
       0.439
EEZ61977.1
Hydrogenase, Fe-only; KEGG: mta:Moth_1717 3.2e-135 iron hydrogenase, small subunit K00336; Psort location: Cytoplasmic, score: 8.87.
       0.428
EEZ60888.1
YhgE/Pip domain protein; KEGG: cal:orf19.575 7.2e-07 HYR5; similar to HYR1 K01186; Psort location: CytoplasmicMembrane, score: 9.99; overlaps another CDS with the same product name.
  
     0.421
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.