STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61987.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
EEZ61986.1
Hypothetical protein.
 
    0.953
EEZ61985.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 7.63.
 
     0.835
EEZ61983.1
Hypothetical protein.
       0.506
cydD
Thiol reductant ABC exporter, CydD subunit; KEGG: bur:Bcep18194_B1962 5.6e-99 ABC efflux pump, fused ATPase and inner membrane subunits K06021:K06022; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.440
EEZ61988.1
Polysulfide reductase, NrfD; KEGG: afu:AF2386 6.5e-25 molybdopterin oxidoreductase, membrane subunit K00185; Psort location: CytoplasmicMembrane, score: 9.99.
       0.407
EEZ61989.1
KEGG: bcz:BCZK3833 1.5e-11 transcriptional regulator, GntR family.
       0.407
EEZ61990.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2768 7.3e-26 predicted membrane-bound protease subunit K01423; Psort location: Cytoplasmic, score: 8.87.
       0.407
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.