STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62003.1Hypothetical protein; Psort location: Extracellular, score: 8.82. (40 aa)    
Predicted Functional Partners:
EEZ62004.1
FAD dependent oxidoreductase; KEGG: ctc:CTC02436 2.6e-101 glycerol-3-phosphate dehydrogenase K00111; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEZ62005.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: ctc:CTC02435 2.8e-104 sarcosine oxidase alpha subunit K00301; Psort location: Cytoplasmic, score: 9.98.
       0.773
EEZ62006.1
Hypothetical protein; KEGG: ehi:173.t00005 2.1e-09 NAD(FAD)-dependent dehydrogenase, putative K00301; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEZ62002.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 2.6e-14 membrane protease subunits, stomatin/prohibitin homologs K01423; Psort location: CytoplasmicMembrane, score: 9.75.
       0.446
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.