STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62007.1Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87. (216 aa)    
Predicted Functional Partners:
EEZ60967.1
KEGG: bca:BCE_3365 1.4e-22 protein-tyrosine phosphatase-like protein K01104.
  
  
  0.541
EEZ62008.1
Hypothetical protein.
       0.481
EEZ61751.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL4813 0.00013 putative two-component system response regulator; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.478
EEZ60969.1
Oxidoreductase molybdopterin binding domain protein; KEGG: rha:RHA1_ro01563 6.3e-17 probable sufite oxidase K00387.
  
     0.462
EEZ61312.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00012 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.446
EEZ60947.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 4.3e-05 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.435
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
      
 0.424
EEZ60889.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00071 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.423
EEZ60840.1
DEAD/DEAH box helicase; KEGG: fal:FRAAL3782 2.2e-214 putative ATP-dependent helicase K01529; Psort location: Cytoplasmic, score: 8.87.
  
     0.414
EEZ60877.1
KEGG: ava:Ava_B0029 0.00081 two component transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.97.
  
     0.400
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.