STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62009.1Amino acid permease; KEGG: eci:UTI89_C0120 2.3e-16 aroP; aromatic amino acid transport protein AroP K03293; Psort location: CytoplasmicMembrane, score: 10.00. (462 aa)    
Predicted Functional Partners:
EEZ61041.1
Acetamidase/Formamidase family protein; KEGG: gka:GK2270 4.7e-70 acetamidase/formamidase K01426; Psort location: Cytoplasmic, score: 8.87.
 
     0.568
EEZ62054.1
Prephenate dehydratase; KEGG: mxa:MXAN_3221 3.7e-47 pheA; chorismate mutase/prephenate dehydratase K01850; Psort location: Cytoplasmic, score: 9.98.
   
 0.463
EEZ62008.1
Hypothetical protein.
       0.459
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
   
 0.459
EEZ60401.1
Transporter, major facilitator family protein; KEGG: cal:orf19.4384 2.0e-19 HXT10; fructose symporter K01804; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.420
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.