STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62029.1Putative dinuclear metal center protein, YbgI family. (264 aa)    
Predicted Functional Partners:
EEZ62030.1
Putative zinc ribbon domain protein; KEGG: eci:UTI89_C0735 0.00028 tolA; membrane spanning protein TolA K03646; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.831
rpe
KEGG: ade:Adeh_3971 5.4e-46 ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 8.87.
       0.822
EEZ62028.1
Aminotransferase, class V; KEGG: fal:FRAAL5862 1.6e-76 iscS; cysteine desulfurase K04487; Psort location: Cytoplasmic, score: 8.87.
       0.794
EEZ62025.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.773
EEZ62026.1
6-O-methylguanine DNA methyltransferase, DNA binding domain protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
       0.619
EEZ62031.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.613
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
  0.485
folE
GTP cyclohydrolase I; KEGG: cno:NT01CX_0377 2.1e-60 folE; GTP cyclohydrolase I K01495; Psort location: Cytoplasmic, score: 8.87.
    
 0.477
EEZ61734.1
Hydrolase, NUDIX family; KEGG: bha:BH1524 6.7e-13 ADP-ribose pyrophosphatase, putative K01515; Psort location: Cytoplasmic, score: 8.87.
   
  0.444
relA
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
   
 
  0.440
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.