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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62032.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (115 aa)    
Predicted Functional Partners:
EEZ62034.1
KEGG: lwe:lwe1833 8.5e-87 DAK2 domain protein K00863; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.936
EEZ62260.1
EDD domain protein, DegV family.
 
    0.678
EEZ62036.1
Putative RNA methyltransferase, RsmD family; KEGG: tfu:Tfu_0647 7.5e-24 conserved hypothetical protein 95 K00599; Psort location: Cytoplasmic, score: 8.87.
  
    0.620
EEZ62035.1
KEGG: mta:Moth_0923 2.7e-122 recG; ATP-dependent DNA helicase RecG K03655; Psort location: Cytoplasmic, score: 8.87.
       0.616
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.616
EEZ62132.1
EDD domain protein, DegV family; Psort location: Cytoplasmic, score: 8.87.
 
    0.602
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.600
EEZ60668.1
EDD domain protein, DegV family; Psort location: Cytoplasmic, score: 8.87.
 
    0.592
EEZ62033.1
Hypothetical protein.
       0.572
EEZ61337.1
EDD domain protein, DegV family; Psort location: Cytoplasmic, score: 8.87.
 
    0.482
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.