STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62038.1Hypothetical protein; KEGG: rxy:Rxyl_1642 0.0020 ATP synthase F0, B subunit K02109; Psort location: Cytoplasmic, score: 8.87. (155 aa)    
Predicted Functional Partners:
EEZ62039.1
Putative ACR, COG1399.
       0.819
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.767
EEZ62034.1
KEGG: lwe:lwe1833 8.5e-87 DAK2 domain protein K00863; Psort location: Cytoplasmic, score: 8.87.
 
     0.651
EEZ62205.1
Hypothetical protein; KEGG: ret:RHE_CH02138 0.00013 putative adenylate/guanylate cyclase protein K01768; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.602
rpmF
Ribosomal protein L32; Psort location: Extracellular, score: 8.82.
 
     0.577
EEZ62036.1
Putative RNA methyltransferase, RsmD family; KEGG: tfu:Tfu_0647 7.5e-24 conserved hypothetical protein 95 K00599; Psort location: Cytoplasmic, score: 8.87.
       0.571
EEZ62035.1
KEGG: mta:Moth_0923 2.7e-122 recG; ATP-dependent DNA helicase RecG K03655; Psort location: Cytoplasmic, score: 8.87.
       0.568
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.553
EEZ61181.1
Kinase domain protein; KEGG: rxy:Rxyl_0021 6.2e-100 serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.512
EEZ62274.1
CBS domain protein; KEGG: mta:Moth_2414 2.8e-65 inorganic diphosphatase K01507; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.510
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.