STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62090.14Fe-4S binding domain protein; KEGG: tte:TTE0128 2.3e-22 nuoI; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) K00338; Psort location: Cytoplasmic, score: 8.87. (154 aa)    
Predicted Functional Partners:
EEZ62094.1
NADH-ubiquinone/plastoquinone (complex I) family protein; KEGG: mhu:Mhun_1741 4.4e-122 NADH dehydrogenase (quinone) K05903; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EEZ62092.1
Hypothetical protein; KEGG: eci:UTI89_C0735 0.00049 tolA; membrane spanning protein TolA K03646; Psort location: Cytoplasmic, score: 8.87.
 
 0.997
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 0.996
EEZ62093.1
KEGG: tte:TTE0125 1.5e-50 nuoB; NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases K00331; Psort location: Cytoplasmic, score: 8.87.
 
 0.989
EEZ62091.1
KEGG: tte:TTE0127 7.5e-95 nuoD; NADH:ubiquinone oxidoreductase 49 kD subunit 7 K00333; Psort location: Cytoplasmic, score: 8.87.
 
 0.987
EEZ61978.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cte:CT0282 1.2e-73 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.98.
  
 0.986
EEZ61676.1
NADH dehydrogenase; KEGG: eca:ECA1245 1.8e-70 hyfC; hydrogenase-4 component C; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.974
EEZ61671.1
Respiratory-chain NADH dehydrogenase, 30 Kd subunit; KEGG: eci:UTI89_C3084 1.0e-202 hycE; formate hydrogenlyase subunit 5 precursor; Psort location: Cytoplasmic, score: 8.87.
 
 0.965
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
  
 0.934
EEZ61669.1
NADH ubiquinone oxidoreductase, 20 Kd subunit; KEGG: aha:AHA_2504 1.3e-76 hydrogenase-4 component I; Psort location: Cytoplasmic, score: 8.87.
 
 0.910
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.