close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62107.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.97. (231 aa)    
Predicted Functional Partners:
EEZ62108.1
VTC domain protein; Psort location: Cytoplasmic, score: 8.87.
 
    0.974
EEZ62106.1
Hypothetical protein; KEGG: eci:UTI89_C1627 2.7e-13 entS; EntS/YbdA MFS transporter; Psort location: Cellwall, score: 9.17.
 
     0.947
EEZ62109.1
KEGG: rha:RHA1_ro05622 6.9e-37 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.591
EEZ62110.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bce:BC0573 2.3e-38 two component system histidine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
 
    0.557
EEZ62081.1
Hypothetical protein.
  
  
 0.538
EEZ61216.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.538
EEZ61041.1
Acetamidase/Formamidase family protein; KEGG: gka:GK2270 4.7e-70 acetamidase/formamidase K01426; Psort location: Cytoplasmic, score: 8.87.
   
    0.515
EEZ62105.1
Putative dGTPase; KEGG: chy:CHY_0453 3.7e-86 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129; Psort location: Cytoplasmic, score: 8.87; Belongs to the dGTPase family. Type 2 subfamily.
       0.510
hflB
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
    
 
 0.419
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
 
 0.407
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.