STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62199.1Hypothetical protein; KEGG: eci:UTI89_C4143 6.2e-17 putative autotransport adhesin K01423; Psort location: Cellwall, score: 9.17. (970 aa)    
Predicted Functional Partners:
EEZ62200.1
MMPL family protein; Psort location: CytoplasmicMembrane, score: 9.99.
     0.973
EEZ62201.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
 
    0.561
EEZ62202.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.431
EEZ62203.1
Hydrogenase maturation protease; KEGG: gme:Gmet_3329 1.8e-13 peptidase M52, hydrogenase maturation peptidase K03605; Psort location: Cytoplasmic, score: 8.87.
       0.431
pyrC
Amidohydrolase family protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
       0.402
pyrB
KEGG: pca:Pcar_1615 2.2e-81 aspartate carbamoyltransferase K00609; Psort location: Cytoplasmic, score: 9.98; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
       0.402
pyrR
Phosphoribosyl transferase domain protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
       0.402
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
       0.400
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate.
       0.400
EEZ62195.1
Oxidoreductase NAD-binding domain protein; KEGG: cno:NT01CX_0392 1.7e-33 dihydroorotate dehydrogenase electron transfer subunit K00226; Psort location: Cytoplasmic, score: 9.98.
       0.400
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.