STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62202.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (156 aa)    
Predicted Functional Partners:
EEZ62203.1
Hydrogenase maturation protease; KEGG: gme:Gmet_3329 1.8e-13 peptidase M52, hydrogenase maturation peptidase K03605; Psort location: Cytoplasmic, score: 8.87.
       0.822
EEZ62201.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
       0.773
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.450
EEZ62199.1
Hypothetical protein; KEGG: eci:UTI89_C4143 6.2e-17 putative autotransport adhesin K01423; Psort location: Cellwall, score: 9.17.
       0.431
EEZ62200.1
MMPL family protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.431
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.