close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62203.1Hydrogenase maturation protease; KEGG: gme:Gmet_3329 1.8e-13 peptidase M52, hydrogenase maturation peptidase K03605; Psort location: Cytoplasmic, score: 8.87. (176 aa)    
Predicted Functional Partners:
EEZ61275.1
KEGG: gme:Gmet_3331 5.8e-104 nickel-dependent hydrogenase, large subunit K05922; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.857
EEZ62202.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.822
EEZ61276.1
Tat pathway signal sequence domain protein; KEGG: gsu:GSU0782 2.2e-63 nickel-dependent hydrogenase, small subunit K06282; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.808
EEZ62201.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEZ61274.1
Putative Ni/Fe-hydrogenase, b-type cytochrome subunit; KEGG: hac:Hac_0746 2.1e-12 hyaC; Ni/Fe hydrogenase cytochrome b subunit K00122; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.755
EEZ61617.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.475
EEZ61671.1
Respiratory-chain NADH dehydrogenase, 30 Kd subunit; KEGG: eci:UTI89_C3084 1.0e-202 hycE; formate hydrogenlyase subunit 5 precursor; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.452
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.450
EEZ62015.1
4Fe-4S binding domain protein; KEGG: mka:MK0307 4.3e-09 fwdF_1; probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing K00205; Psort location: Cytoplasmic, score: 8.87.
 
     0.435
EEZ62199.1
Hypothetical protein; KEGG: eci:UTI89_C4143 6.2e-17 putative autotransport adhesin K01423; Psort location: Cellwall, score: 9.17.
       0.431
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.