STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemLKEGG: pca:Pcar_0266 5.6e-122 glutamate-1-semialdehyde-2,1-aminomutase K01845; Psort location: Cytoplasmic, score: 8.87. (431 aa)    
Predicted Functional Partners:
hemB
KEGG: ppd:Ppro_0442 6.6e-112 porphobilinogen synthase K01698; Psort location: Cytoplasmic, score: 8.87; Belongs to the ALAD family.
 
 
 0.997
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
 0.995
cobA
KEGG: mta:Moth_1248 3.1e-114 uroporphyrin-III C-methyltransferase K02302:K01719; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.960
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.959
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
  
 0.955
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
 0.943
EEZ61841.1
AMP-binding enzyme; KEGG: ava:Ava_3855 1.6e-67 amino acid adenylation; Psort location: Cytoplasmic, score: 9.98; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 
  0.908
EEZ62220.1
KEGG: gka:GK0404 6.4e-34 siroheme synthase K02303:K02304; Psort location: Cytoplasmic, score: 8.87.
   
 0.899
EEZ62214.1
Putative heme d1 biosynthesis radical SAM protein NirJ2; KEGG: tel:tlr0226 0.00024 pyruvate formate lyase activating enzyme K04069; Psort location: Cytoplasmic, score: 8.87.
    
  0.807
EEZ61579.1
AMP-binding enzyme; KEGG: cje:Cj1307 1.5e-82 putative amino acid activating enzyme K01932; Psort location: Cytoplasmic, score: 9.98; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 
  0.760
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.