STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62222.1Transcriptional regulator, LuxR family; KEGG: mka:MK1013 0.00041 ntpK; archaeal/vacuolar-type H+-ATPase subunit K K02124; Psort location: CytoplasmicMembrane, score: 9.99. (511 aa)    
Predicted Functional Partners:
EEZ61312.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00012 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.649
EEZ61234.1
Histidine kinase; KEGG: bsu:BG12215 4.7e-14 yfiJ; two-component sensor histidine kinase. potential cognate response regulator is YfiK K02480; Psort location: CytoplasmicMembrane, score: 9.99.
  
  0.618
EEZ61821.1
Putative phage tail component domain protein; KEGG: pen:PSEEN1359 3.1e-41 gacS; GacS sensor kinase protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.617
EEZ62220.1
KEGG: gka:GK0404 6.4e-34 siroheme synthase K02303:K02304; Psort location: Cytoplasmic, score: 8.87.
 
     0.612
ilvE
KEGG: cac:CAC1479 2.0e-117 ilvE; branched-chain-amino-acid transaminase (ilvE) K00826; Psort location: Cytoplasmic, score: 8.87.
       0.570
cobA
KEGG: mta:Moth_1248 3.1e-114 uroporphyrin-III C-methyltransferase K02302:K01719; Psort location: Cytoplasmic, score: 8.87.
     
 0.537
EEZ62216.1
Putative heme d1 biosynthesis radical SAM protein NirJ1; KEGG: mbo:Mb3756 4.2e-10 possible transferase; Psort location: Cytoplasmic, score: 8.87.
  
    0.533
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
    0.533
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
       0.532
EEZ62221.1
Hypothetical protein.
       0.532
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.