STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62235.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (233 aa)    
Predicted Functional Partners:
EEZ62234.1
KEGG: reh:H16_B2463 2.5e-30 ABC-type transporter, duplicated ATPase domains:PepT family; Psort location: CytoplasmicMembrane, score: 9.49.
 
  0.960
EEZ62236.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.26.
 
     0.936
EEZ61772.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A3169 5.4e-32 ABC transporter component K06021; Psort location: CytoplasmicMembrane, score: 9.49.
  
  0.851
EEZ60712.1
KEGG: bcl:ABC0410 6.9e-37 ribose ABC transporter ATP-binding protein K02056; Psort location: CytoplasmicMembrane, score: 9.49.
  
  0.851
EEZ61062.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A0982 1.4e-36 ABC transporter component; Psort location: CytoplasmicMembrane, score: 9.49.
  
  0.848
EEZ61059.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL4449 1.1e-40 putative dipeptide/oligopeptide transport protein (ABC superfamily, atp_bind); Psort location: CytoplasmicMembrane, score: 9.49.
  
  0.846
EEZ61000.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL4449 8.2e-35 putative dipeptide/oligopeptide transport protein (ABC superfamily, atp_bind); Psort location: CytoplasmicMembrane, score: 9.49.
  
  0.843
EEZ60962.1
KEGG: fal:FRAAL3863 9.9e-38 putative ABC transport protein, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
  0.840
EEZ60541.1
KEGG: ypk:y0234 2.8e-33 ATP-binding protein of ABC transporter K02056; Psort location: CytoplasmicMembrane, score: 9.49.
  
  0.839
EEZ62232.1
KEGG: rru:Rru_A0863 4.0e-73 ABC transporter, transmembrane region K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.837
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.