STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62236.1Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.26. (224 aa)    
Predicted Functional Partners:
EEZ62235.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.936
EEZ62234.1
KEGG: reh:H16_B2463 2.5e-30 ABC-type transporter, duplicated ATPase domains:PepT family; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.844
EEZ62232.1
KEGG: rru:Rru_A0863 4.0e-73 ABC transporter, transmembrane region K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.813
EEZ62233.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A0881 6.4e-82 ABC transporter component K06021; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.803
EEZ60540.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.680
EEZ62228.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.663
EEZ61702.1
KEGG: ava:Ava_B0209 0.0013 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.652
EEZ60970.1
Oxidoreductase molybdopterin binding domain protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.626
EEZ60963.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.617
EEZ62237.1
Transcriptional regulator, AraC family; KEGG: bca:BCE_3772 4.1e-07 adaA; Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K00567; Psort location: Cytoplasmic, score: 8.87.
 
     0.605
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.