STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ62249.1KEGG: bur:Bcep18194_A4762 1.0e-19 ABC amino acid transporter, periplasmic ligand binding protein K01713. (315 aa)    
Predicted Functional Partners:
EEZ61486.1
KEGG: hpa:HPAG1_0922 1.2e-25 amino acid ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.899
EEZ61484.1
ABC transporter, ATP-binding protein; KEGG: psb:Psyr_0356 4.4e-67 ABC transporter K02028; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.889
EEZ62054.1
Prephenate dehydratase; KEGG: mxa:MXAN_3221 3.7e-47 pheA; chorismate mutase/prephenate dehydratase K01850; Psort location: Cytoplasmic, score: 9.98.
     
 0.796
EEZ61487.1
ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 2.2e-24 fliY; cystine-binding periplasmic protein precursor K02030:K02424; Belongs to the bacterial solute-binding protein 3 family.
  
     0.761
EEZ62248.1
Hypothetical protein.
       0.732
EEZ62250.1
Hypothetical protein.
       0.533
EEZ62247.1
Hypothetical protein; KEGG: ace:Acel_1973 0.0046 V-type H(+)-translocating pyrophosphatase K01507.
       0.521
cobA
KEGG: mta:Moth_1248 3.1e-114 uroporphyrin-III C-methyltransferase K02302:K01719; Psort location: Cytoplasmic, score: 8.87.
   
 
  0.519
EEZ62251.1
ComF/gntX family protein; KEGG: reh:H16_A0339 4.1e-16 predicted amidophosphoribosyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
    0.419
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.