STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pncBNicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. (491 aa)    
Predicted Functional Partners:
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
 
 0.932
nadC
Quinolinate phosphoribosyl transferase, C-terminal domain protein; KEGG: cch:Cag_0412 3.4e-60 modD; putative molybdenum utilization protein ModD K03813; Psort location: Cytoplasmic, score: 9.98; Belongs to the NadC/ModD family.
   
 0.918
pgsA
KEGG: bcl:ABC2202 5.9e-40 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.909
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
     
 0.688
EEZ60502.1
Isochorismatase family protein; KEGG: tac:Ta0454 2.5e-23 isochorismatase K05993.
  
 
 0.674
EEZ62262.1
PSP1 C-terminal domain protein; KEGG: azo:azo0828 6.6e-05 pseudouridylate synthase K01718; Psort location: Cytoplasmic, score: 8.87.
       0.672
EEZ62263.1
KEGG: gsu:GSU2230 6.2e-36 holB; DNA polymerase III, delta prime subunit K02341; Psort location: Cytoplasmic, score: 8.87.
       0.672
EEZ61044.1
MazG family protein; KEGG: pha:PSHAa0740 4.8e-45 mazG; nucleoside triphosphate pyrophosphohydrolase, non-specific K02428; Psort location: Cytoplasmic, score: 8.87.
     
 0.659
EEZ60306.1
Bacterial capsule synthesis protein; KEGG: chy:CHY_2488 0.00010 5'-nucleotidase domain/Ser/Thr protein phosphatase domain protein K01119.
  
    0.653
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
  
 
 0.609
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.