STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61758.1Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.87. (149 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
    
  0.736
EEZ61743.1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
  
     0.673
EEZ61757.1
Transposase; KEGG: nha:Nham_4600 0.0099 feruloyl esterase; Psort location: Cytoplasmic, score: 8.87.
       0.568
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.473
EEZ62251.1
ComF/gntX family protein; KEGG: reh:H16_A0339 4.1e-16 predicted amidophosphoribosyltransferase; Psort location: Cytoplasmic, score: 8.87.
   
    0.451
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.440
EEZ61720.1
TraG/TraD family protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.414
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.