STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61767.1Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87. (189 aa)    
Predicted Functional Partners:
EEZ61766.1
KEGG: rru:Rru_A0864 1.4e-72 ABC transporter, transmembrane region K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.828
EEZ61765.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A2339 3.9e-75 ABC transporter component K06021; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.815
EEZ61762.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.809
EEZ60542.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
  
     0.726
EEZ61763.1
Cobalt transport protein; KEGG: psb:Psyr_4398 0.0027 protein-disulfide reductase K04084; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.561
EEZ61764.1
KEGG: fal:FRAAL3863 3.7e-38 putative ABC transport protein, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.541
EEZ61768.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.501
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
      
 0.424
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.