STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61800.1Hypothetical protein; KEGG: vfi:VFA0490 1.3e-08 soluble lytic murein transglycosylase K01238; Psort location: Cytoplasmic, score: 8.87. (431 aa)    
Predicted Functional Partners:
EEZ61799.1
Hydrolase, alpha/beta domain protein; KEGG: ccr:CC2411 1.4e-13 3-oxoadipate enol-lactone hydrolase / 4-carboxymuconolactone decarboxylase K01055:K01607; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.648
EEZ61801.1
Alcohol dehydrogenase, iron-dependent; KEGG: sth:STH535 2.9e-70 NADH-dependent butanol dehydrogenase K00100; Psort location: Cytoplasmic, score: 9.98.
  
    0.490
EEZ61779.1
KEGG: rpa:RPA4597 2.3e-22 hypothetical protein K01875; Psort location: Cytoplasmic, score: 8.87.
  
     0.409
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.