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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61847.1LytTr DNA-binding domain protein; Psort location: Cytoplasmic, score: 8.87. (226 aa)    
Predicted Functional Partners:
EEZ61069.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE0871 1.2e-64 Regulator of cell autolysis K07704; Psort location: Cytoplasmic, score: 8.87.
  
 0.759
EEZ61848.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
       0.750
EEZ61849.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.565
EEZ61845.1
Hypothetical protein; KEGG: mma:MM2607 8.9e-05 nucleotidyltransferase; Psort location: Cytoplasmic, score: 8.87.
       0.550
EEZ61846.1
Nucleotidyltransferase domain protein; KEGG: mma:MM1920 6.6e-06 nucleotidyltransferase; Psort location: Cytoplasmic, score: 8.87.
       0.550
EEZ61850.1
Dinitrogenase iron-molybdenum cofactor; Psort location: Cytoplasmic, score: 8.87.
       0.477
EEZ61851.1
Hypothetical protein.
       0.434
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.430
EEZ60704.1
Hypothetical protein; KEGG: rso:RSc2990 0.00062 dsbD, RS01128; probable thiol:disulfide interchange transmembrane protein K04084; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.403
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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