STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61881.1Transketolase, thiamine diphosphate binding domain protein; KEGG: mta:Moth_0236 3.9e-82 transketolase-like K00615; Psort location: Cytoplasmic, score: 8.87. (284 aa)    
Predicted Functional Partners:
EEZ61880.1
Transketolase, pyridine binding domain protein; KEGG: pca:Pcar_2719 6.4e-82 transketolase, C-terminal subunit K00615; Psort location: Cytoplasmic, score: 8.87.
 0.999
rpe
KEGG: ade:Adeh_3971 5.4e-46 ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 8.87.
  
 0.997
rpiB
KEGG: plt:Plut_1017 5.0e-34 ribose/galactose isomerase K01808; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.952
fsa
KEGG: tth:TTC0701 1.4e-56 transaldolase K00616; Psort location: Cytoplasmic, score: 8.87.
    
 0.948
EEZ61053.1
Putative glucose-6-phosphate isomerase; KEGG: rpc:RPC_3670 1.2e-71 transaldolase K00616:K01810; Psort location: Cytoplasmic, score: 9.98.
 
   
 0.945
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
     
 0.900
gap
KEGG: mta:Moth_0262 1.4e-107 glyceraldehyde-3-phosphate dehydrogenase, type I K00134; Psort location: Cytoplasmic, score: 9.98.
    
 0.892
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.889
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
  0.888
EEZ60449.1
KEGG: mba:Mbar_A0176 1.5e-91 fructose-bisphosphate aldolase K01622; Psort location: Cytoplasmic, score: 8.87.
    
  0.886
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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