STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61886.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
EEZ61884.1
Bacterial transcriptional activator domain protein; KEGG: rle:RL3062 0.00099 cya3; putative adenylate cyclase K01768; Psort location: Cytoplasmic, score: 8.87.
       0.701
EEZ61885.1
Hypothetical protein.
       0.701
EEZ61887.1
tRNA nucleotidyltransferase/poly(A) polymerase family protein; KEGG: ctc:CTC01205 1.3e-74 tRNA nucleotidyltransferase (CCA-adding enzyme) K00974; Psort location: Cytoplasmic, score: 8.87; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.569
EEZ61880.1
Transketolase, pyridine binding domain protein; KEGG: pca:Pcar_2719 6.4e-82 transketolase, C-terminal subunit K00615; Psort location: Cytoplasmic, score: 8.87.
       0.548
EEZ61881.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: mta:Moth_0236 3.9e-82 transketolase-like K00615; Psort location: Cytoplasmic, score: 8.87.
       0.548
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.548
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
       0.548
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.