STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiEThiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. (216 aa)    
Predicted Functional Partners:
thiD
KEGG: cac:CAC3095 4.9e-68 thiK; phosphomethylpyrimidine kinase K00877:K00941; Psort location: Cytoplasmic, score: 8.87.
 
 0.999
thiM
Putative hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
 
 0.999
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
     
 0.889
EEZ61889.1
Hypothetical protein.
       0.773
hydG
Iron-only hydrogenase maturation rSAM protein HydG; KEGG: cpf:CPF_2775 1.6e-16 radical SAM domain protein K01012; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.757
EEZ61733.1
HAD hydrolase, family IA, variant 3; KEGG: msm:MSMEG_4183 6.7e-16 phosphoglycolate phosphatase, chromosomal K01091; Psort location: Cytoplasmic, score: 8.87.
      0.711
EEZ61893.1
KEGG: tte:TTE1497 6.0e-15 thi80; thiamine pyrophosphokinase K00949.
     
 0.631
EEZ61888.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.508
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
      
 0.418
argH
KEGG: sth:STH486 6.1e-125 argininosuccinate lyase K01755; Psort location: Cytoplasmic, score: 8.87.
  
   0.414
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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