STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vsrDNA mismatch endonuclease Vsr; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination. (175 aa)    
Predicted Functional Partners:
EEZ61984.1
KEGG: tde:TDE0299 1.5e-32 mutT; mutator mutT protein K03574; Psort location: Cytoplasmic, score: 8.87.
 
      0.887
EEZ61927.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.814
EEZ61926.1
UvrD/REP helicase; KEGG: eba:ebA4390 2.7e-38 uvrD; ATP-dependent DNA helicase K03657; Psort location: Cytoplasmic, score: 8.87; Belongs to the helicase family. UvrD subfamily.
       0.773
EEZ62144.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ecc:c2001 0.00025 rstB; sensor protein rstB K07639.
   
 
 0.581
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
      
 0.471
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.