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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61927.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (890 aa)    
Predicted Functional Partners:
EEZ61926.1
UvrD/REP helicase; KEGG: eba:ebA4390 2.7e-38 uvrD; ATP-dependent DNA helicase K03657; Psort location: Cytoplasmic, score: 8.87; Belongs to the helicase family. UvrD subfamily.
 
 
 0.997
vsr
DNA mismatch endonuclease Vsr; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.
 
     0.814
EEZ61119.1
Hypothetical protein; KEGG: sco:SCO1554 2.9e-13 SCL11.10c; putative nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K04719; Psort location: Cellwall, score: 8.93.
  
     0.764
EEZ61071.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.749
EEZ61136.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rco:RC0311 0.0010 barA; histidine kinase sensor protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.730
EEZ62288.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 2.5e-07 serine/threonine protein kinase with TPR repeats K00908.
  
     0.708
EEZ61320.1
Hypothetical protein; KEGG: mtu:Rv2413c 0.0011 putative DNA polymerase III, delta subunit K02340.
  
     0.697
EEZ62015.1
4Fe-4S binding domain protein; KEGG: mka:MK0307 4.3e-09 fwdF_1; probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing K00205; Psort location: Cytoplasmic, score: 8.87.
  
     0.690
EEZ62102.1
Branched-chain amino acid transport protein (AzlD); Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.680
EEZ60512.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.651
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.