STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61279.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (593 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.957
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
  0.894
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
   
 0.878
EEZ61685.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: fnu:FN0454 3.9e-169 aldehyde dehydrogenase B K00138; Psort location: Cytoplasmic, score: 9.98.
     
 0.864
EEZ62076.1
KEGG: gsu:GSU1616 2.8e-41 ImpB/MucB/SamB family protein K02346; Psort location: Cytoplasmic, score: 8.87.
     
 0.674
EEZ60386.1
ImpB/MucB/SamB family protein; KEGG: btl:BALH_p0040 4.6e-56 uvrX; DNA-damage repair protein (DNA polymerase IV) K00961; Psort location: Cytoplasmic, score: 8.87.
     
 0.674
EEZ60368.1
Trypsin; KEGG: blo:BL0555 4.2e-62 degP; possible DO serine protease; Psort location: Cytoplasmic, score: 8.87.
    
 0.653
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.623
EEZ61277.1
Base excision DNA repair protein, HhH-GPD family; KEGG: gsu:GSU1613 1.6e-53 A/G-specific adenine glycosylase, putative K03575; Psort location: Cytoplasmic, score: 8.87.
       0.614
EEZ61278.1
Transcriptional regulator, Rrf2 family; KEGG: ama:AM656 4.5e-06 aminotransferase, class V K04487; Psort location: Cytoplasmic, score: 8.87.
       0.567
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.