STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcAArginine deiminase; KEGG: tde:TDE0451 2.5e-119 arcA; arginine deiminase K01478; Psort location: Cytoplasmic, score: 8.87. (417 aa)    
Predicted Functional Partners:
argF-3
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.953
argH
KEGG: sth:STH486 6.1e-125 argininosuccinate lyase K01755; Psort location: Cytoplasmic, score: 8.87.
     
 0.889
argG
KEGG: sth:STH2874 4.7e-125 argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 8.87; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
 0.888
EEZ61954.1
KEGG: pmu:PM0808 7.1e-51 arg; ornithine carbamoyltransferase K00611; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.882
EEZ61833.1
Hypothetical protein; KEGG: pac:PPA0632 2.1e-186 glycine amidinotransferase K00613; Psort location: Cytoplasmic, score: 8.87.
    
 0.840
EEZ61291.1
Transporter, basic amino acid/polyamine antiporter (APA) family; KEGG: eci:UTI89_C0120 7.8e-11 aroP; aromatic amino acid transport protein AroP K03293; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.775
argF
KEGG: lla:L0113 5.1e-105 otcA; ornithine carbamoyltransferase K00611; Psort location: Cytoplasmic, score: 9.98; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.682
argF-2
KEGG: mta:Moth_2286 6.9e-69 ornithine carbamoyltransferase K00611; Psort location: Cytoplasmic, score: 9.65.
  
 
 0.682
EEZ60914.1
KEGG: lmf:LMOf2365_0045 8.7e-62 argF-1; ornithine carbamoyltransferase K00611; Psort location: Cytoplasmic, score: 9.98; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.682
EEZ60581.1
KEGG: mmy:MSC_0864 2.1e-83 arcC; carbamate kinase K00926; Belongs to the carbamate kinase family.
 
  
 0.648
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.