STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61307.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (115 aa)    
Predicted Functional Partners:
napA
Putative periplasmic nitrate reductase, large subunit; Catalytic subunit of the nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
  
 0.988
napD
NapD protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
  
 0.941
EEZ60517.1
Putative nitrite reductase; KEGG: chy:CHY_0608 4.3e-44 putative cytochrome c552 K03385; Psort location: Cytoplasmic, score: 8.87; Belongs to the cytochrome c-552 family.
  
 
 0.892
EEZ61304.1
Ferredoxin-type protein, NapH/MauN family; KEGG: eci:UTI89_C2482 3.1e-34 napH; ferredoxin-type protein K02574; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.885
EEZ61306.1
Hypothetical protein.
       0.773
EEZ61444.1
Hypothetical protein; KEGG: sfr:Sfri_3690 0.0080 flavocytochrome c K00238.
  
 
 0.761
EEZ60770.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.761
EEZ62013.1
Tat pathway signal sequence domain protein; KEGG: afu:AF1203 1.2e-85 molybdopterin oxidoreductase, molybdopterin binding subunit K00183; Psort location: Cytoplasmic, score: 8.87.
   
 0.717
EEZ61492.1
Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; KEGG: ece:Z2575 9.3e-184 putative oxidoreductase, major subunit K07309; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.717
EEZ60637.1
Molybdopterin guanine dinucleotide-containing S/N-oxide reductase; KEGG: mta:Moth_1389 9.0e-202 trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.717
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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