STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
napAPutative periplasmic nitrate reductase, large subunit; Catalytic subunit of the nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (854 aa)    
Predicted Functional Partners:
EEZ61307.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.988
EEZ61309.1
KEGG: eci:UTI89_C2483 6.5e-41 napG; ferredoxin-type protein, subunit of nitrate reductase, periplasmic K02573; Psort location: Cytoplasmic, score: 8.87.
 
  0.943
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.911
napD
NapD protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
 
 0.908
EEZ61304.1
Ferredoxin-type protein, NapH/MauN family; KEGG: eci:UTI89_C2482 3.1e-34 napH; ferredoxin-type protein K02574; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.895
EEZ60517.1
Putative nitrite reductase; KEGG: chy:CHY_0608 4.3e-44 putative cytochrome c552 K03385; Psort location: Cytoplasmic, score: 8.87; Belongs to the cytochrome c-552 family.
     
 0.878
EEZ61306.1
Hypothetical protein.
       0.752
EEZ61977.1
Hydrogenase, Fe-only; KEGG: mta:Moth_1717 3.2e-135 iron hydrogenase, small subunit K00336; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.741
EEZ61303.1
Rhodanese-like protein; KEGG: azo:azo2810 8.8e-14 conserved hypothetical protein K01010; Psort location: Cytoplasmic, score: 8.87.
    
 0.669
EEZ61729.1
4Fe-4S binding domain protein; KEGG: hal:VNG0830G 6.0e-31 hmoA; molybdopterin oxidoreductase, iron-sulfur binding subunit K00184; Psort location: Cytoplasmic, score: 9.98.
  
 0.663
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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