STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61318.1Radical SAM-linked protein; KEGG: sat:SYN_01355 7.1e-05 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.87. (227 aa)    
Predicted Functional Partners:
EEZ61319.1
Radical SAM domain protein; KEGG: ctc:CTC02064 9.2e-122 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
 
    0.958
ade
Adenine deaminase; KEGG: mta:Moth_0463 8.0e-162 adenine deaminase K01486; Psort location: Cytoplasmic, score: 8.87; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
       0.773
EEZ61320.1
Hypothetical protein; KEGG: mtu:Rv2413c 0.0011 putative DNA polymerase III, delta subunit K02340.
 
     0.753
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
     0.555
EEZ61957.1
Putative FeS-containing Cyanobacterial-specific oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
  
     0.547
EEZ61321.1
Putative rod shape-determining protein RodA; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
       0.532
mrdA
Penicillin-binding protein 2; KEGG: ppd:Ppro_2545 1.7e-81 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 9.49.
       0.466
mreD
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 9.99.
       0.455
EEZ61325.1
Cell shape determining protein, MreB/Mrl family; KEGG: hpa:HPAG1_1318 1.5e-80 rod shape-determining protein K01529; Psort location: Cytoplasmic, score: 9.98.
       0.411
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.