STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61320.1Hypothetical protein; KEGG: mtu:Rv2413c 0.0011 putative DNA polymerase III, delta subunit K02340. (419 aa)    
Predicted Functional Partners:
EEZ61119.1
Hypothetical protein; KEGG: sco:SCO1554 2.9e-13 SCL11.10c; putative nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K04719; Psort location: Cellwall, score: 8.93.
  
     0.763
EEZ62288.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 2.5e-07 serine/threonine protein kinase with TPR repeats K00908.
 
     0.761
EEZ61318.1
Radical SAM-linked protein; KEGG: sat:SYN_01355 7.1e-05 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
 
     0.753
EEZ61071.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.730
EEZ61319.1
Radical SAM domain protein; KEGG: ctc:CTC02064 9.2e-122 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
       0.706
EEZ61927.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.697
EEZ62205.1
Hypothetical protein; KEGG: ret:RHE_CH02138 0.00013 putative adenylate/guanylate cyclase protein K01768; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.696
EEZ61136.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rco:RC0311 0.0010 barA; histidine kinase sensor protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.670
EEZ60578.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.661
EEZ60904.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.656
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.