Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEZ61511.1 | atpA | HMPREF0762_00849 | HMPREF0762_00852 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: rso:RSp0810 3.0e-13 atpC2, RS01897; probable ATP synthase epsilon chain protein K02114; Psort location: Cytoplasmic, score: 8.87. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
| EEZ61511.1 | atpD | HMPREF0762_00849 | HMPREF0762_00850 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: rso:RSp0810 3.0e-13 atpC2, RS01897; probable ATP synthase epsilon chain protein K02114; Psort location: Cytoplasmic, score: 8.87. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| EEZ61511.1 | atpE | HMPREF0762_00849 | HMPREF0762_00855 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: rso:RSp0810 3.0e-13 atpC2, RS01897; probable ATP synthase epsilon chain protein K02114; Psort location: Cytoplasmic, score: 8.87. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| EEZ61511.1 | atpG | HMPREF0762_00849 | HMPREF0762_00851 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: rso:RSp0810 3.0e-13 atpC2, RS01897; probable ATP synthase epsilon chain protein K02114; Psort location: Cytoplasmic, score: 8.87. | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| EEZ61511.1 | atpH | HMPREF0762_00849 | HMPREF0762_00853 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: rso:RSp0810 3.0e-13 atpC2, RS01897; probable ATP synthase epsilon chain protein K02114; Psort location: Cytoplasmic, score: 8.87. | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| EEZ61511.1 | prmC | HMPREF0762_00849 | HMPREF0762_00663 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: rso:RSp0810 3.0e-13 atpC2, RS01897; probable ATP synthase epsilon chain protein K02114; Psort location: Cytoplasmic, score: 8.87. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.614 |
| EEZ61528.1 | prmC | HMPREF0762_00866 | HMPREF0762_00663 | Sua5/YciO/YrdC/YwlC family protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the SUA5 family. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.927 |
| EEZ61552.1 | prmC | HMPREF0762_00890 | HMPREF0762_00663 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.597 |
| atpA | EEZ61511.1 | HMPREF0762_00852 | HMPREF0762_00849 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: rso:RSp0810 3.0e-13 atpC2, RS01897; probable ATP synthase epsilon chain protein K02114; Psort location: Cytoplasmic, score: 8.87. | 0.999 |
| atpA | atpD | HMPREF0762_00852 | HMPREF0762_00850 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpA | atpE | HMPREF0762_00852 | HMPREF0762_00855 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpA | atpG | HMPREF0762_00852 | HMPREF0762_00851 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpA | atpH | HMPREF0762_00852 | HMPREF0762_00853 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpA | prmC | HMPREF0762_00852 | HMPREF0762_00663 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.629 |
| atpD | EEZ61511.1 | HMPREF0762_00850 | HMPREF0762_00849 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: rso:RSp0810 3.0e-13 atpC2, RS01897; probable ATP synthase epsilon chain protein K02114; Psort location: Cytoplasmic, score: 8.87. | 0.999 |
| atpD | atpA | HMPREF0762_00850 | HMPREF0762_00852 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
| atpD | atpE | HMPREF0762_00850 | HMPREF0762_00855 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpD | atpG | HMPREF0762_00850 | HMPREF0762_00851 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpD | atpH | HMPREF0762_00850 | HMPREF0762_00853 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpD | prmC | HMPREF0762_00850 | HMPREF0762_00663 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.614 |
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