STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61328.1NLPA lipoprotein. (323 aa)    
Predicted Functional Partners:
EEZ61595.1
KEGG: rha:RHA1_ro08170 1.7e-19 ABC transporter, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.960
EEZ61596.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1759 1.7e-49 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit K02049; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.911
EEZ61963.1
KEGG: rha:RHA1_ro08170 5.0e-06 ABC transporter, permease component; Psort location: CytoplasmicMembrane, score: 9.97.
 
 
 0.874
EEZ61964.1
KEGG: aha:AHA_2937 3.9e-27 taurine ABC transporter, ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 0.811
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
   
    0.713
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.615
EEZ61966.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.589
trxB
KEGG: mta:Moth_2420 4.2e-69 thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.98.
       0.491
prmC
protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.479
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
       0.479
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.