STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61336.1ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 9.99. (292 aa)    
Predicted Functional Partners:
EEZ61335.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_A3976 3.1e-50 ABC polysaccharide/polyol phosphate export pump, ATPase subunit K01990; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.999
EEZ61334.1
Glycosyltransferase, group 4 family; KEGG: tte:TTE0154 1.4e-63 rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase K02851; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.802
EEZ60281.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: lwe:lwe1065 1.8e-12 tagB; teichoic acid biosynthesis protein B K01005; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.700
glf
KEGG: lsl:LSL_1548 1.1e-125 glf; UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.612
EEZ60802.1
Glycosyltransferase, group 2 family protein; KEGG: sty:STY4088 8.2e-22 putative glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.585
EEZ60280.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: lwe:lwe1065 1.8e-31 tagB; teichoic acid biosynthesis protein B K01005; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.579
EEZ60556.1
KEGG: fal:FRAAL1796 3.1e-16 putative ABC transporter ATP-binding subunit; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
  0.571
EEZ61337.1
EDD domain protein, DegV family; Psort location: Cytoplasmic, score: 8.87.
       0.531
EEZ61071.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.524
EEZ60772.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 9.99.
    
  0.492
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.