STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61343.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (266 aa)    
Predicted Functional Partners:
EEZ61342.1
Sigma-70 region 2; KEGG: reh:H16_A1096 0.00059 rpoE3; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family. ECF subfamily.
       0.797
EEZ61345.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.745
EEZ61344.1
KEGG: noc:Noc_2142 1.7e-40 ABC transporter, ATPase subunit; Psort location: CytoplasmicMembrane, score: 9.49.
       0.733
EEZ61341.1
Tat pathway signal sequence domain protein; KEGG: lpl:lp_3125 1.6e-31 fumarate reductase, flavoprotein subunit precursor, N-terminally truncated K00238; Psort location: CytoplasmicMembrane, score: 9.82.
       0.458
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.