STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61344.1KEGG: noc:Noc_2142 1.7e-40 ABC transporter, ATPase subunit; Psort location: CytoplasmicMembrane, score: 9.49. (291 aa)    
Predicted Functional Partners:
EEZ61345.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.981
EEZ61342.1
Sigma-70 region 2; KEGG: reh:H16_A1096 0.00059 rpoE3; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.837
EEZ61343.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.733
EEZ62113.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_A3402 2.9e-47 ABC efflux pump, ATPase subunit K06020; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 
0.463
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.450
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.448
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.445
EEZ61511.1
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: rso:RSp0810 3.0e-13 atpC2, RS01897; probable ATP synthase epsilon chain protein K02114; Psort location: Cytoplasmic, score: 8.87.
    
   0.440
EEZ61341.1
Tat pathway signal sequence domain protein; KEGG: lpl:lp_3125 1.6e-31 fumarate reductase, flavoprotein subunit precursor, N-terminally truncated K00238; Psort location: CytoplasmicMembrane, score: 9.82.
       0.437
atpH
ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
   0.414
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.