STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61345.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (412 aa)    
Predicted Functional Partners:
EEZ61344.1
KEGG: noc:Noc_2142 1.7e-40 ABC transporter, ATPase subunit; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.981
EEZ61342.1
Sigma-70 region 2; KEGG: reh:H16_A1096 0.00059 rpoE3; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.852
mutF-2
KEGG: fal:FRAAL1877 3.0e-43 putative ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.787
mutF
KEGG: fal:FRAAL1877 4.3e-17 putative ABC transporter ATP-binding protein; Psort location: Cytoplasmic, score: 8.87.
 
 0.774
EEZ61343.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.745
EEZ61441.1
Putative heme ABC exporter, ATP-binding protein CcmA; KEGG: fal:FRAAL5527 6.6e-32 antibiotic resistance ATP-binding protein K06020; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.732
EEZ61233.1
KEGG: bur:Bcep18194_A4734 1.2e-41 nodI; nodulation ABC transporter, ATPase subunit NodI K01990; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.732
EEZ60771.1
KEGG: bur:Bcep18194_A3518 5.1e-41 ABC transporter, ATPase subunit K01990; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.732
EEZ60795.1
KEGG: fal:FRAAL3681 8.2e-50 putative ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.732
EEZ60555.1
KEGG: fal:FRAAL1796 8.1e-43 putative ABC transporter ATP-binding subunit; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.732
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.