STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61353.1Acetyltransferase, GNAT family; KEGG: ctc:CTC01188 2.3e-15 acetyltransferase K00680; Psort location: Cytoplasmic, score: 8.87. (173 aa)    
Predicted Functional Partners:
glf
KEGG: lsl:LSL_1548 1.1e-125 glf; UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 8.87.
       0.651
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.608
EEZ61870.1
Aminotransferase, class I/II; KEGG: blo:BL0712 1.6e-197 aspartate aminotransferase K00812; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.597
EEZ61352.1
Sodium:neurotransmitter symporter family protein; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
       0.551
rimI
Ribosomal-protein-alanine acetyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.550
EEZ61355.1
Hypothetical protein.
       0.479
EEZ61351.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.455
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.