STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61377.1Hypothetical protein; Psort location: Extracellular, score: 8.82. (61 aa)    
Predicted Functional Partners:
EEZ61378.1
Putative phage virion morphogenesis protein; KEGG: fal:FRAAL6277 3.1e-137 putative ABC transporter ATP-binding subunit; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
       0.727
EEZ61375.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.468
EEZ61376.1
DNA-binding helix-turn-helix protein; KEGG: par:Psyc_0717 0.0013 putative aminotransferase K00812.
       0.468
EEZ61380.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; KEGG: bfr:BF3545 2.7e-161 O-acetylhomoserine (thiol)-lyase K01740; Psort location: Cytoplasmic, score: 9.98.
       0.449
EEZ61381.1
PAP2 family protein; KEGG: lsl:LSL_1484 9.4e-10 pgpB; phosphatidylglycerophosphatase B K01094; Psort location: CytoplasmicMembrane, score: 9.26.
       0.446
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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