STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61392.1Cell envelope-like function transcriptional attenuator common domain protein. (474 aa)    
Predicted Functional Partners:
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.782
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.621
EEZ61390.1
NifU-like protein; Psort location: Cytoplasmic, score: 8.87.
       0.510
EEZ61119.1
Hypothetical protein; KEGG: sco:SCO1554 2.9e-13 SCL11.10c; putative nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K04719; Psort location: Cellwall, score: 8.93.
  
     0.477
secG
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.465
EEZ60429.1
Putative peptidoglycan binding domain protein; KEGG: cjk:jk2095 2.1e-09 cwlM; N-acetylmuramoyl-L-alanine amidase K01448; Psort location: Cytoplasmic, score: 8.87.
  
     0.462
EEZ61389.1
Hypothetical protein.
       0.455
EEZ62102.1
Branched-chain amino acid transport protein (AzlD); Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.453
EEZ61136.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rco:RC0311 0.0010 barA; histidine kinase sensor protein; Psort location: Cytoplasmic, score: 8.87.
  
    0.431
tsf
Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
       0.421
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.