STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61399.1Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99. (285 aa)    
Predicted Functional Partners:
EEZ61398.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A2633 3.3e-30 ABC transporter component K06021; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.990
EEZ61400.1
Cobalamin biosynthesis protein CbiM; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.984
EEZ61586.1
BioY family protein; KEGG: oih:OB1717 3.6e-17 biotin synthase K01012; Psort location: CytoplasmicMembrane, score: 9.99.
   
 0.540
EEZ61031.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.498
EEZ62224.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A3169 1.1e-30 ABC transporter component K06021; Psort location: CytoplasmicMembrane, score: 9.49.
   
  0.429
EEZ62234.1
KEGG: reh:H16_B2463 2.5e-30 ABC-type transporter, duplicated ATPase domains:PepT family; Psort location: CytoplasmicMembrane, score: 9.49.
   
  0.429
EEZ61764.1
KEGG: fal:FRAAL3863 3.7e-38 putative ABC transport protein, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
   
  0.429
EEZ61772.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A3169 5.4e-32 ABC transporter component K06021; Psort location: CytoplasmicMembrane, score: 9.49.
   
  0.429
EEZ61834.1
KEGG: fal:FRAAL5387 7.4e-36 putative ATP-binding ABC transporter protein; Psort location: CytoplasmicMembrane, score: 9.49.
   
  0.429
EEZ61299.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1962 2.6e-31 ABC efflux pump, fused ATPase and inner membrane subunits K06021:K06022; Psort location: CytoplasmicMembrane, score: 9.49.
   
  0.429
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.