STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61400.1Cobalamin biosynthesis protein CbiM; Psort location: CytoplasmicMembrane, score: 9.99. (334 aa)    
Predicted Functional Partners:
EEZ61398.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A2633 3.3e-30 ABC transporter component K06021; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.990
EEZ61399.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.984
EEZ62225.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
   
 0.660
EEZ62235.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
   
 0.660
EEZ61763.1
Cobalt transport protein; KEGG: psb:Psyr_4398 0.0027 protein-disulfide reductase K04084; Psort location: CytoplasmicMembrane, score: 9.99.
   
 0.660
EEZ61773.1
Cobalt transport protein; KEGG: tte:TTE1704 0.0053 hydrogenase 4 membrane subunit; Psort location: CytoplasmicMembrane, score: 9.75; overlaps another CDS with the same product name.
   
 0.660
EEZ61835.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
   
 0.660
EEZ61300.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.97.
   
 0.660
EEZ61468.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 7.63.
   
 0.660
EEZ61531.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
   
 0.660
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.