STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61402.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (247 aa)    
Predicted Functional Partners:
EEZ60491.1
FAD binding domain protein; KEGG: mbu:Mbur_2437 7.7e-44 protein of unknown function DUF224 K08263; Psort location: Cytoplasmic, score: 9.98.
  
 0.974
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
    
 0.945
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.895
accB
acetyl-CoA carboxylase, biotin carboxyl carrier protein; KEGG: chy:CHY_1999 6.1e-164 oadA; oxaloacetate decarboxylase, alpha subunit K01571; Psort location: Cytoplasmic, score: 8.87.
     
 0.812
EEZ60430.1
Polyprenyl synthetase; KEGG: mth:MTH50 6.6e-48 bifunctional short chain isoprenyl diphosphate synthase K00787:K00795; Psort location: Cytoplasmic, score: 9.98; Belongs to the FPP/GGPP synthase family.
  
 
 0.584
EEZ61685.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: fnu:FN0454 3.9e-169 aldehyde dehydrogenase B K00138; Psort location: Cytoplasmic, score: 9.98.
   
 
 0.560
ilvB
Acetolactate synthase, large subunit, biosynthetic type; KEGG: mba:Mbar_A0218 4.9e-155 acetolactate synthase large subunit K01652; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.551
EEZ61401.1
Hypothetical protein.
       0.546
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
  
 0.543
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.534
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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