STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqeGHAD phosphatase, family IIIA; KEGG: saa:SAUSA300_1557 2.5e-16 hydrolase, HAD-superfamily, subfamily IIIA K01112; Psort location: Cytoplasmic, score: 8.87. (165 aa)    
Predicted Functional Partners:
mltG
YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
       0.750
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.750
EEZ61424.1
RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.747
EEZ61421.1
KEGG: rxy:Rxyl_1461 1.8e-38 chorismate synthase K01736.
 
     0.678
aroK-2
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.654
EEZ61419.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.579
EEZ61263.1
Hydrolase, HD family; KEGG: tde:TDE1747 1.7e-18 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.577
EEZ61418.1
Creatinase; KEGG: chy:CHY_1873 5.5e-60 pepP; aminopeptidase P K01262; Psort location: Cytoplasmic, score: 8.87.
       0.499
EEZ61427.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
    0.460
EEZ61426.1
Hypothetical protein; KEGG: tbd:Tbd_2668 1.4e-16 phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase K01923; Psort location: CytoplasmicMembrane, score: 9.99.
       0.432
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.