STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61427.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (188 aa)    
Predicted Functional Partners:
EEZ61426.1
Hypothetical protein; KEGG: tbd:Tbd_2668 1.4e-16 phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase K01923; Psort location: CytoplasmicMembrane, score: 9.99.
       0.803
EEZ61428.1
ATPase, AAA family; KEGG: fal:FRAAL5255 2.2e-95 putative polynucleotide enzyme with nucleotide triphosphate hydrolase domain K00961; Psort location: Cytoplasmic, score: 8.87.
       0.709
EEZ61429.1
ABC1 family protein; KEGG: aha:AHA_0086 3.5e-42 ubiB; 2-polyprenylphenol 6-hydroxylase K00492; Psort location: Cytoplasmic, score: 8.87.
       0.668
EEZ61458.1
Metallo-beta-lactamase domain protein; KEGG: fnu:FN0900 1.3e-19 metal dependent hydrolase; Psort location: Cytoplasmic, score: 8.87.
   
    0.506
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.488
mltG
YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
       0.479
EEZ61424.1
RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.479
yqeG
HAD phosphatase, family IIIA; KEGG: saa:SAUSA300_1557 2.5e-16 hydrolase, HAD-superfamily, subfamily IIIA K01112; Psort location: Cytoplasmic, score: 8.87.
  
    0.460
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.