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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61438.1Putative heme exporter protein CcmD. (64 aa)    
Predicted Functional Partners:
EEZ61439.1
Cytochrome c assembly protein; KEGG: gbe:GbCGDNIH1_0271 7.2e-19 heme chaperone heme-lyase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.822
EEZ61440.1
Putative heme exporter protein CcmB; Psort location: CytoplasmicMembrane, score: 9.99.
       0.700
EEZ61442.1
Putative cytochrome c-type biogenesis protein CcmF; KEGG: gbe:GbCGDNIH1_0269 2.6e-60 heme chaperone--apocytochrome heme-lyase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.696
EEZ61441.1
Putative heme ABC exporter, ATP-binding protein CcmA; KEGG: fal:FRAAL5527 6.6e-32 antibiotic resistance ATP-binding protein K06020; Psort location: CytoplasmicMembrane, score: 9.49.
       0.695
EEZ61443.1
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
       0.693
EEZ61437.1
Nucleotidyl transferase; KEGG: cpf:CPF_0487 1.9e-59 galU; UTP-glucose-1-phosphate uridylyltransferase K00963; Psort location: Cytoplasmic, score: 8.87.
       0.593
EEZ61444.1
Hypothetical protein; KEGG: sfr:Sfri_3690 0.0080 flavocytochrome c K00238.
       0.446
folC
Bifunctional protein FolC; KEGG: tte:TTE0783 7.2e-74 folC; Folylpolyglutamate synthase K01930; Psort location: Cytoplasmic, score: 8.87.
       0.411
EEZ61435.1
uracil-DNA glycosylase, family 4; KEGG: sso:SSO2275 5.7e-42 DNA polymerase bacteriophage-type K02334; Psort location: Cytoplasmic, score: 8.87.
       0.411
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.411
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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