STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61440.1Putative heme exporter protein CcmB; Psort location: CytoplasmicMembrane, score: 9.99. (240 aa)    
Predicted Functional Partners:
EEZ61439.1
Cytochrome c assembly protein; KEGG: gbe:GbCGDNIH1_0271 7.2e-19 heme chaperone heme-lyase; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.999
EEZ61441.1
Putative heme ABC exporter, ATP-binding protein CcmA; KEGG: fal:FRAAL5527 6.6e-32 antibiotic resistance ATP-binding protein K06020; Psort location: CytoplasmicMembrane, score: 9.49.
  
  0.986
EEZ61442.1
Putative cytochrome c-type biogenesis protein CcmF; KEGG: gbe:GbCGDNIH1_0269 2.6e-60 heme chaperone--apocytochrome heme-lyase; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.965
EEZ61443.1
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
 
 0.925
EEZ61438.1
Putative heme exporter protein CcmD.
       0.700
EEZ61444.1
Hypothetical protein; KEGG: sfr:Sfri_3690 0.0080 flavocytochrome c K00238.
  
    0.555
EEZ61437.1
Nucleotidyl transferase; KEGG: cpf:CPF_0487 1.9e-59 galU; UTP-glucose-1-phosphate uridylyltransferase K00963; Psort location: Cytoplasmic, score: 8.87.
       0.493
EEZ61552.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.430
EEZ61320.1
Hypothetical protein; KEGG: mtu:Rv2413c 0.0011 putative DNA polymerase III, delta subunit K02340.
  
     0.427
EEZ61994.1
Polysulfide reductase, NrfD; KEGG: hal:VNG0831G 5.3e-62 moz; molybdopterin oxidoreductase, membrane subunit K00185; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.422
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.